Soil Nematodes in Organic Farming Systems

Organic Agriculture April 08, 2014 Print Friendly and PDF

eOrganic authors:

Carmen Ugarte, University of Illinois

Ed Zaborski, University of Illinois


Nematodes are microscopic, wormlike organisms (Fig. 1) that live in water films and water-filled pore spaces in the soil. Typically, they are most abundant in the upper soil layers where organic matter, plant roots, and other resources are most abundant. Nematode abundance in soils—managed and unmanaged—ranges from 1–10 million individuals/m2 (Peterson and Luxton, 1982; Lavelle and Spain, 2001).

Figure 1. A typical free-living, bacterial-feeding nematode.
Figure 1. A typical free-living, bacterial-feeding nematode, less than 1mm (0.04in) in length. Figure credit: Ed Zaborski, University of Illinois.

Most research on soil nematodes has focused on the plant-parasitic nematodes that attack the roots of cultivated crops. Less attention has been given to nematodes that are not plant-feeders and play beneficial roles in the soil environment. This article describes the important roles played by nematodes in soil ecosystems, as well as their potential to be used as indicators of soil condition in organic farming systems.

Nematode Feeding Habits

Nematodes can be classified into functional groups based on their feeding habits, which can often be deduced from the structure of their mouthparts (Fig. 2). In agricultural soils, the most common groups of nematodes are the bacterial-feeders, fungal-feeders, plant parasites, predators, and omnivores. Predatory nematodes feed on protozoa and other soil nematodes. Omnivores feed on different foods depending on environmental conditions and food availability; for example, omnivorous nematodes can be predators, but in the absence of their primary food source, they can feed on fungi or bacteria.

Figure 2. Nematode feeding types; mouthpart structures.
Figure 2. Nematodes can be classified into different feeding groups based on the structure of their mouthparts. (a) bacterial feeder, (b) fungal feeder, (c) plant feeder, (d) predator, (e) omnivore. Figure credit: Ed Zaborski, University of Illinois.

Importance of Nematodes in Agricultural Systems

Nematodes contribute to a variety of functions within the soil system. In agricultural systems, nematodes can enhance nutrient mineralization and act as biological control agents.

Nematodes and Soil Fertility

Soil nematodes, especially bacterial- and fungal-feeding nematodes, can contribute to maintaining adequate levels of plant-available N in farming systems relying on organic sources of fertility (Ferris et al., 1998). The process of converting nutrients from organic to inorganic form is termed mineralization; mineralization is a critical soil process because plants take up nutrients from the soil primarily in inorganic forms. Nematodes contribute directly to nutrient mineralization through their feeding interactions. For example, bacterial-feeding nematodes consume N in the form of proteins and other N-containing compounds in bacterial tissues and release excess N in the form of ammonium, which is readily available for plant use. Indirectly, nematodes enhance decomposition and nutrient cycling by grazing and rejuvenating old, inactive bacterial and fungal colonies, and by spreading bacteria and fungi to newly available organic residues. In the absence of grazers, such as nematodes and protozoa, nutrients can remain immobilized and unavailable for plant uptake in bacterial and fungal biomass.

Bacterial-feeding nematodes are the most abundant nematode group in agricultural soils. Their abundance closely follows that of bacterial populations, which tend to increase when soil disturbances, such as tillage, increase the availability of readily-decomposable organic matter. Nitrogen mineralization in the soil occurs at a higher rate when bacterial-feeding nematodes are present than when they are absent. The contribution of bacterial-feeding nematodes to soil N supply depends, in part, on the quality and quantity of soil organic matter fueling the system. Net N mineralization from decomposing organic residues takes place when the carbon:nitrogen (C:N) ratio of organic residue is below 20 (that is, 20 parts C to 1 part N). When the C:N ratio is greater than 30, the rate of mineralization decreases because microbes compete for N to meet their nutritional requirements. In this situation, N is immobilized in the microbial biomass. Incorporation of manure, compost, and cover crops with intermediate C:N ratios (ranging from 10 to 18) may stimulate bacterial growth and the abundance of bacterial-feeding nematodes, and increase soil N availability to plants.

Fungal-feeding nematodes are relatively more abundant in less-disturbed (e.g. notill systems) and perennial systems, where conditions for fungal growth are promoted, than in disturbed systems. Like bacterial feeding nematodes, fungal-feeding nematodes contribute to the process of nutrient mineralization by releasing N and other plant nutrients from consumed fungal tissue. However, in agricultural systems, bacterial-feeding nematodes typically release more inorganic N than fungal-feeding nematodes.

Nematodes as Natural Enemies and Biological Control Agents

Predatory nematodes are of interest because of their role in regulating the populations of other organisms. They generally feed on smaller organisms like protozoa and other nematodes. Thus they can help moderate population growth of bacterial- and fungal-feeding nematodes and protozoa, and help regulate populations of plant-parasitic nematodes.

Insect-parasitic nematodes are species of bacterial-feeding nematodes that live in close association with specific species of bacteria; together, they can infect and kill a range of insect hosts. The infective juvenile stage of insect-parasitic nematodes seeks out insect hosts to continue its development into adults. Once a host is found, the nematodes penetrate the insect body and release their bacterial associates into the insect’s body cavity. These bacteria multiply and overwhelm the immune response of the host insect, ultimately killing the host. The nematodes feed on these bacteria, mature, and reproduce until all the resources within the insect host are consumed; then, infective juvenile nematodes escape the insect host's body and disperse in the soil to seek new hosts. Insect-parasitic nematodes are available commercially for use in inundative releases to manage the populations of a variety of insect pests.

Plant-Parasitic Nematodes

Most plant-parasitic nematodes feed on the roots of plants. Some species attach to the outside surface of plant roots (Fig. 3), piercing the root tissue to suck up the cellular content; other species pierce and penetrate the roots of plants, living and reproducing entirely within the root itself. A relatively small number of important plant-parasitic nematode species are known to cause substantial economic damage in cropping systems around the world. The determination of tolerance limits or economic thresholds for plant-parasitic nematodes varies with many factors like species, plant tolerance, and soil type. Because plant parasitic nematodes show varying degrees of host specificity, carefully designed crop rotations are usually a powerful tool for reducing nematode-associated yield losses.

Figure 3. Symptoms of white potato cyst nematode, Globodera pallida.
Figure 3. White potato cyst nematode, Globodera pallida (Stone) Behrens, on plant roots. Cyst nematode females attach to root systems with their mouthparts to feed, and then their bodies swell into egg-filled cysts that can be visible to the naked eye. Figure credit: Bonsak Hammeraas, Bioforsk—Norwegian Institute for Agricultural and Environmental Research,

Soil Nematode Communities

The proportions of the different feeding groups in the soil nematode community vary between systems and seasons, and they are influenced by a variety of factors, including crop and soil management practices (Freckman and Ettema, 1993) and the presence and abundance of natural enemies. Management practices like tillage, crop rotation, and the use of organic amendments influence the physical and biological characteristics of the soil that influence the abundance of nematodes. Fungal-feeding, predatory, and omnivorous nematodes are very sensitive to soil disturbances (Ferris et al., 2001), and agricultural systems with fewer physical and chemical disturbances, such as pastures, hay fields, and orchards, tend to support larger populations of these nematodes than more frequently disturbed systems like vegetable- and row-crop fields. On the other hand, tillage and incorporation of organic residues increase the proportion of some bacterial-feeding nematodes (Griffiths et al., 1994; Ferris et al., 2001; Nahar et al., 2006), often offsetting declines in the numbers of other feeding groups and increasing the total abundance of nematodes (Neher, 1999). The wide variety of natural enemies that feed on or infect nematodes—predatory nematodes, predatory microarthropods, and nematode-trapping fungi, for example—may have a considerable impact on nematodes in agricultural systems (Stirling, 1991).

Implications for Farming System Management

Agricultural management may increase the abundance of soil nematodes, primarily through the increase in the abundance of bacterial-feeding nematodes associated with tillage and the incorporation of organic residues (Neher, 1999). Soil conditions in agricultural production systems can be improved by enhancing nutrient availability and providing habitat for beneficial soil organisms. Maintenance of large populations of bacterial-feeding nematodes with practices that promote N mineralization throughout the growing season may enhance crop productivity, but a surplus of mineral N is not desirable from the environmental point of view because of an increased risk of nitrate leaching. In an ideal production system, N supply would be synchronized with plant demand. On the other hand, cultural practices like tillage or cultivation may reduce the complexity of the soil food web. Thus, a decrease in the frequency and intensity of tillage may promote the conservation of predatory nematodes and contribute to improved farming system performance.

References and Citations

  • Ferris, H., T. Bongers, and R. G. M. de Goede. 2001. A framework for soil food web diagnostics: Extension of the nematode faunal analysis concept. Applied Soil Ecology 18: 13–29. Available online at: (verified 8 Apr 2014).
  • Ferris, H., R. C. Venette, H. R. van der Meulen, and S. S. Lau. 1998. Nitrogen mineralization by bacterial-feeding nematodes: Verification and measurement. Plant and Soil 203: 159–171. Available online at: (verified 26 Mar 2014).
  • Freckman, D. W., and C. H. Ettema. 1993. Assessing nematode communities in agroecosystems of varying human intervention. Agriculture, Ecosystems & Environment 45: 239–261. Available for purchase online at: (verified 8 Apr 2014).
  • Griffiths, B. S., K. Ritz, and R. E. Wheatley. 1994. Nematodes as indicators of enhanced microbiological activity in a Scottish organic farming system. Soil Use and Management. 10: 20–24. Available for purchase online at: (verified 8 Apr 2014).
  • Lavelle, P., and A. V. Spain. 2001. Soil ecology. Kluwer Academic Publishers, Boston, MA.
  • Nahar, M. S., P. S. Grewal, S. A. Miller, D. Stinner, B. R. Stinner, M. D. Kleinhenz, A. Wszelaki, and D. Doohan. 2006. Differential effects of raw and composted manure on nematode community, and its indicative value for soil microbial, physical and chemical properties. Applied Soil Ecology 34: 140–151. Available online at: (verified 8 Apr 2014).
  • Neher, D. A. 1999. Soil community composition and ecosystem processes: Comparing agricultural systems with natural ecosystems. Agroforestry Systems 45: 159–185. Available for purchase online at: (verified 8 Apr 2014).
  • Peterson, H., and M. Luxton. 1982. A comparative analysis of soil fauna populations and their role in decomposition processes. Oikos 39: 287–388.
  • Stirling, G. R. 1991. Biological control of plant parasitic nematodes. CAB International, Wallingford, U.K.

Further Reading


This is an eOrganic article and was reviewed for compliance with National Organic Program regulations by members of the eOrganic community. Always check with your organic certification agency before adopting new practices or using new materials. For more information, refer to eOrganic's articles on organic certification.

eOrganic 4495

Connect with us

  • Twitter
  • Facebook
  • YouTube


eXtension is an interactive learning environment delivering research-based information emerging from America's land-grant university system.


Donate to Organic Agriculture

Your donation keeps eXtension growing.

Give Now